BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A06LP1|AL428477
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1531 1734 0.0
>3x_Contig1531
Length = 8774
Score = 1734 bits (869), Expect = 0.0
Identities = 885/895 (98%), Gaps = 1/895 (0%)
Strand = Plus / Plus
Query: 1 gatccaagaaggaagatgaaacagttgatgaagccgccgctgcagctgacaaaattgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3188 gatccaagaaggaagatgaaacagttgatgaagccgccgctgcagctgacaaaattgcac 3247
Query: 61 aattgaagttgcaacaagataaagacggtatatctgaccgtgtcgttaccggtgttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3248 aattgaagttgcaacaagataaagacggtatatctgaccgtgtcgttaccggtgttctag 3307
Query: 121 attcattggaaacttctcgtgatattwagctatcttctgtttccttgttgttccacggta 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3308 attcattggaaacttctcgtgatattaagctatcttctgtttccttgttgttccacggta 3367
Query: 181 aagttttgatccaagattcccaattggaattaaattatggtcgtcgttatggtttattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3368 aagttttgatccaagattcccaattggaattaaattatggtcgtcgttatggtttattgg 3427
Query: 241 gtgawaacggttgtggtaagtccactttcttgaaggctgttgccagcagagaatacccaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3428 gtgaaaacggttgtggtaagtccactttcttgaaggctgttgccagcagagaatacccaa 3487
Query: 301 ttcctgawaatwttgatatttwtttgttggacgaacctgctgagccaagtgaatattccg 360
||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3488 ttcctgaaaatattgatatttatttgttggacgaacctgctgagccaagtgaatattccg 3547
Query: 361 ctttggaatacgtcgtcagggaagctcaaggtgaattgaaaagattggwagatttggtag 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3548 ctttggaatacgtcgtcagggaagctcaaggtgaattgaaaagattggaagatttggtag 3607
Query: 421 aaaagattctcttggaagatggtcctgaatctgatctattggwaccactatacgaaagaa 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3608 aaaagattctcttggaagatggtcctgaatctgatctattggaaccactatacgaaagaa 3667
Query: 481 tggacgatatggatccatccactttcgaatccagagctgctattatcttgattggtttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3668 tggacgatatggatccatccactttcgaatccagagctgctattatcttgattggtttgg 3727
Query: 541 gtttcaactctwagactatcaacaagaagaccaaggacatgtctgtgtggttggwagatg 600
||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 3728 gtttcaactctaagactatcaacaagaagaccaaggacatgtctg-gtggttggaagatg 3786
Query: 601 cgtgtcgctcttgctaaggctttgttcgttaagccaactcttttgttgttggatgaccca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3787 cgtgtcgctcttgctaaggctttgttcgttaagccaactcttttgttgttggatgaccca 3846
Query: 661 accgcgcatttggatttggaagcttgtgtttggttagaagaatatttgaagagattcgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3847 accgcgcatttggatttggaagcttgtgtttggttagaagaatatttgaagagattcgac 3906
Query: 721 agaactttggttcttgtctctcattctcaagatttcttgaacggtgtttgtaccaatatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3907 agaactttggttcttgtctctcattctcaagatttcttgaacggtgtttgtaccaatatg 3966
Query: 781 ttagatatgagattacaaaagttgatggcatacggtggtaattacgactcctacgttaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3967 ttagatatgagattacaaaagttgatggcatacggtggtaattacgactcctacgttaag 4026
Query: 841 actcgttccgaattggagaccaatcaaatgaaacaatacaccaaacaacaagaag 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4027 actcgttccgaattggagaccaatcaaatgaaacaatacaccaaacaacaagaag 4081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7294
Number of Sequences: 1807
Number of extensions: 7294
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)